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G4MoleculeTable.hh
Go to the documentation of this file.
Or view
the newest version in sPHENIX GitHub for file G4MoleculeTable.hh
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//
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// ********************************************************************
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// * License and Disclaimer *
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// * *
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// * The Geant4 software is copyright of the Copyright Holders of *
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// * the Geant4 Collaboration. It is provided under the terms and *
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// * conditions of the Geant4 Software License, included in the file *
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// * LICENSE and available at http://cern.ch/geant4/license . These *
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// * include a list of copyright holders. *
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// * *
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// * Neither the authors of this software system, nor their employing *
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// * institutes,nor the agencies providing financial support for this *
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// * work make any representation or warranty, express or implied, *
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// * regarding this software system or assume any liability for its *
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// * use. Please see the license in the file LICENSE and URL above *
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// * for the full disclaimer and the limitation of liability. *
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// * *
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// * This code implementation is the result of the scientific and *
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// * technical work of the GEANT4 collaboration. *
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// * By using, copying, modifying or distributing the software (or *
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// * any work based on the software) you agree to acknowledge its *
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// * use in resulting scientific publications, and indicate your *
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// * acceptance of all terms of the Geant4 Software license. *
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// ********************************************************************
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//
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// Author: Mathieu Karamitros
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// The code is developed in the framework of the ESA AO7146
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//
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// We would be very happy hearing from you, send us your feedback! :)
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//
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// In order for Geant4-DNA to be maintained and still open-source,
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// article citations are crucial.
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// If you use Geant4-DNA chemistry and you publish papers about your software,
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// in addition to the general paper on Geant4-DNA:
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//
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// Int. J. Model. Simul. Sci. Comput. 1 (2010) 157–178
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//
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// we would be very happy if you could please also cite the following
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// reference papers on chemistry:
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//
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// J. Comput. Phys. 274 (2014) 841-882
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// Prog. Nucl. Sci. Tec. 2 (2011) 503-508
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#ifndef G4MOLECULETABLE_HH_
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#define G4MOLECULETABLE_HH_
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#include "
globals.hh
"
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#include "
G4MoleculeIterator.hh
"
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#include "
G4ElectronOccupancy.hh
"
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class
G4MoleculeDefinition
;
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class
G4MolecularConfiguration
;
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typedef
G4MoleculeIterator<G4MoleculeDefinition>
G4MoleculeDefinitionIterator
;
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typedef
G4MoleculeIterator<G4MolecularConfiguration>
G4ConfigurationIterator
;
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class
G4MoleculeTable
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{
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public
:
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static
G4MoleculeTable
*
Instance
();
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static
G4MoleculeTable
*
GetMoleculeTable
();
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virtual
~G4MoleculeTable
();
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//____________________________________________________________________________
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// The methods below enable to create G4MoleculeDefinition &
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// G4MolecularConfiguration with a user identifier so that they can be retrieved
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// from this molecule table
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//
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//____________________________________________________________________________
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G4MoleculeDefinition
*
CreateMoleculeDefinition
(
const
G4String
& userIdentifier,
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double
diffusion_coefficient);
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//____________________________________________________________________________
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G4MolecularConfiguration
*
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CreateConfiguration
(
const
G4String
& userIdentifier,
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const
G4MoleculeDefinition
* molDef,
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const
G4String
& configurationLabel,
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const
G4ElectronOccupancy
& eOcc);
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G4MolecularConfiguration
*
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CreateConfiguration
(
const
G4String
& userIdentifier,
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G4MoleculeDefinition
*,
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int
charge
,
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double
diffusion_coefficient = -1);
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G4MolecularConfiguration
*
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CreateConfiguration
(
const
G4String
& userIdentifier,
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G4MoleculeDefinition
*);
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G4MolecularConfiguration
*
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CreateConfiguration
(
const
G4String
& userIdentifier,
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G4MoleculeDefinition
*,
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const
G4String
& configurationLabel,
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int
charge = 0);
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//____________________________________________________________________________
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G4MoleculeDefinition
*
GetMoleculeDefinition
(
const
G4String
&,
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bool
mustExist =
true
);
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G4MolecularConfiguration
*
GetConfiguration
(
const
G4String
&,
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bool
mustExist =
true
);
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G4MolecularConfiguration
*
GetConfiguration
(
G4int
id
);
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//____________________________________________________________________________
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void
Insert
(
G4MoleculeDefinition
*);
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void
Finalize
(
G4MoleculeDefinition
*){}
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void
Finalize
();
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//____________________________________________________________________________
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G4MoleculeDefinitionIterator
GetDefintionIterator
()
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{
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return
G4MoleculeDefinitionIterator
(this->
fMoleculeDefTable
);
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}
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G4ConfigurationIterator
GetConfigurationIterator
();
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void
PrepareMolecularConfiguration
();
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int
GetNumberOfDefinedSpecies
();
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protected
:
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G4MoleculeTable
();
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static
G4MoleculeTable
*
fpgMoleculeTable
;
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typedef
std::map<G4String, G4MoleculeDefinition*>
MoleculeDefTable
;
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MoleculeDefTable
fMoleculeDefTable
;
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};
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#endif
/* G4MOLECULETABLE_HH_ */
geant4
tree
geant4-10.6-release
source
processes
electromagnetic
dna
molecules
management
include
G4MoleculeTable.hh
Built by
Jin Huang
. updated:
Wed Jun 29 2022 17:25:30
using
1.8.2 with
ECCE GitHub integration