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G4MoleculeTable.hh
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1 //
2 // ********************************************************************
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4 // * *
5 // * The Geant4 software is copyright of the Copyright Holders of *
6 // * the Geant4 Collaboration. It is provided under the terms and *
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9 // * include a list of copyright holders. *
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14 // * regarding this software system or assume any liability for its *
15 // * use. Please see the license in the file LICENSE and URL above *
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17 // * *
18 // * This code implementation is the result of the scientific and *
19 // * technical work of the GEANT4 collaboration. *
20 // * By using, copying, modifying or distributing the software (or *
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24 // ********************************************************************
25 //
26 // Author: Mathieu Karamitros
27 
28 // The code is developed in the framework of the ESA AO7146
29 //
30 // We would be very happy hearing from you, send us your feedback! :)
31 //
32 // In order for Geant4-DNA to be maintained and still open-source,
33 // article citations are crucial.
34 // If you use Geant4-DNA chemistry and you publish papers about your software,
35 // in addition to the general paper on Geant4-DNA:
36 //
37 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 157–178
38 //
39 // we would be very happy if you could please also cite the following
40 // reference papers on chemistry:
41 //
42 // J. Comput. Phys. 274 (2014) 841-882
43 // Prog. Nucl. Sci. Tec. 2 (2011) 503-508
44 
45 #ifndef G4MOLECULETABLE_HH_
46 #define G4MOLECULETABLE_HH_
47 
48 #include "globals.hh"
49 #include "G4MoleculeIterator.hh"
50 #include "G4ElectronOccupancy.hh"
51 
54 
57 
59 {
60 public:
61  static G4MoleculeTable* Instance();
63  virtual ~G4MoleculeTable();
64 
65  //____________________________________________________________________________
66  // The methods below enable to create G4MoleculeDefinition &
67  // G4MolecularConfiguration with a user identifier so that they can be retrieved
68  // from this molecule table
69  //
70 
71  //____________________________________________________________________________
72 
74  double diffusion_coefficient);
75 
76  //____________________________________________________________________________
77 
79  CreateConfiguration(const G4String& userIdentifier,
80  const G4MoleculeDefinition* molDef,
81  const G4String& configurationLabel,
82  const G4ElectronOccupancy& eOcc);
83 
85  CreateConfiguration(const G4String& userIdentifier,
87  int charge,
88  double diffusion_coefficient = -1);
89 
91  CreateConfiguration(const G4String& userIdentifier,
93 
95  CreateConfiguration(const G4String& userIdentifier,
97  const G4String& configurationLabel,
98  int charge = 0);
99 
100  //____________________________________________________________________________
101 
103  bool mustExist = true);
104 
106  bool mustExist = true);
108 
109  //____________________________________________________________________________
110 
113  void Finalize();
114  //____________________________________________________________________________
115 
117  {
119  }
120 
122 
124 
126 
127 protected:
128  G4MoleculeTable();
129 
131  typedef std::map<G4String, G4MoleculeDefinition*> MoleculeDefTable;
132 
134 };
135 
136 #endif /* G4MOLECULETABLE_HH_ */