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ChromosomeParameterisation.hh
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//
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// ********************************************************************
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// * License and Disclaimer *
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// * *
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// * The Geant4 software is copyright of the Copyright Holders of *
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// * the Geant4 Collaboration. It is provided under the terms and *
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// * conditions of the Geant4 Software License, included in the file *
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// * LICENSE and available at http://cern.ch/geant4/license . These *
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// * include a list of copyright holders. *
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// * *
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// * Neither the authors of this software system, nor their employing *
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// * institutes,nor the agencies providing financial support for this *
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// * work make any representation or warranty, express or implied, *
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// * regarding this software system or assume any liability for its *
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// * use. Please see the license in the file LICENSE and URL above *
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// * for the full disclaimer and the limitation of liability. *
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// * *
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// * This code implementation is the result of the scientific and *
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// * technical work of the GEANT4 collaboration. *
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// * By using, copying, modifying or distributing the software (or *
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// * any work based on the software) you agree to acknowledge its *
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// * use in resulting scientific publications, and indicate your *
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// * acceptance of all terms of the Geant4 Software license. *
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// ********************************************************************
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//
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// This example is provided by the Geant4-DNA collaboration
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// Any report or published results obtained using the Geant4-DNA software
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// and the DNA geometry given in the Geom_DNA example
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// shall cite the following Geant4-DNA collaboration publications:
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// [1] NIM B 298 (2013) 47-54
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// [2] Med. Phys. 37 (2010) 4692-4708
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// The Geant4-DNA web site is available at http://geant4-dna.org
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//
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#ifndef ChromosomeParameterisation_H
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#define ChromosomeParameterisation_H 1
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#include <
G4VPVParameterisation.hh
>
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#include <
G4Box.hh
>
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#include <
G4Orb.hh
>
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#include <
G4Torus.hh
>
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#include <
G4Trap.hh
>
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#include <
G4Trd.hh
>
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#include <
G4Tubs.hh
>
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#include <
G4Ellipsoid.hh
>
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#include <
G4RotationMatrix.hh
>
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#include <
G4ThreeVector.hh
>
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#include <
G4Types.hh
>
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#include <vector>
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class
G4VPhysicalVolume
;
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class
G4Box
;
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class
G4Trd
;
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class
G4Trap
;
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class
G4Cons
;
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class
G4Orb
;
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class
G4Sphere
;
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class
G4Torus
;
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class
G4Para
;
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class
G4Hype
;
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class
G4Tubs
;
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class
G4Polycone
;
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class
G4Polyhedra
;
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class
G4Ellipsoid
;
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//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
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class
ChromosomeParameterisation
:
public
G4VPVParameterisation
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{
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public
:
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ChromosomeParameterisation
(
const
char
*
filename
);
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virtual
~ChromosomeParameterisation
();
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inline
int
GetNumRosettes
()
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{
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return
fPositions
.size();
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}
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virtual
void
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ComputeTransformation
(
const
G4int
copyNo,
G4VPhysicalVolume
* physVol)
const
;
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virtual
void
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ComputeDimensions
(
G4Tubs
& rosette,
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const
G4int
copyNo,
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const
G4VPhysicalVolume
* physVol)
const
;
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private
:
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// Dummy declarations to get rid of warnings ...
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virtual
void
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ComputeDimensions
(
G4Box
&,
const
G4int
,
const
G4VPhysicalVolume
*)
const
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{
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}
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virtual
void
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ComputeDimensions
(
G4Trd
&,
const
G4int
,
const
G4VPhysicalVolume
*)
const
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{
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}
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virtual
void
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ComputeDimensions
(
G4Trap
&,
const
G4int
,
const
G4VPhysicalVolume
*)
const
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{
103
}
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virtual
void
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ComputeDimensions
(
G4Cons
&,
const
G4int
,
const
G4VPhysicalVolume
*)
const
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{
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}
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virtual
void
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ComputeDimensions
(
G4Sphere
&,
const
G4int
,
const
G4VPhysicalVolume
*)
const
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{
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}
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virtual
void
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ComputeDimensions
(
G4Orb
&,
const
G4int
,
const
G4VPhysicalVolume
*)
const
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{
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}
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virtual
void
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ComputeDimensions
(
G4Torus
&,
const
G4int
,
const
G4VPhysicalVolume
*)
const
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{
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}
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virtual
void
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ComputeDimensions
(
G4Para
&,
const
G4int
,
const
G4VPhysicalVolume
*)
const
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{
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}
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virtual
void
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ComputeDimensions
(
G4Hype
&,
const
G4int
,
const
G4VPhysicalVolume
*)
const
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{
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}
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virtual
void
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ComputeDimensions
(
G4Polycone
&,
const
G4int
,
const
G4VPhysicalVolume
*)
const
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{
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}
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virtual
void
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ComputeDimensions
(
G4Polyhedra
&,
const
G4int
,
const
G4VPhysicalVolume
*)
const
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{
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}
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virtual
void
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ComputeDimensions
(
G4Ellipsoid
&,
const
G4int
,
const
G4VPhysicalVolume
*)
const
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{
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}
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std::vector<G4ThreeVector*>
fPositions
;
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std::vector<G4RotationMatrix*>
fRotations
;
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};
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#endif
geant4
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geant4-10.6-release
examples
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medical
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wholeNuclearDNA
include
ChromosomeParameterisation.hh
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. updated:
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