DicomFileCT Class Reference

#include <geant4/tree/geant4-10.6-release/examples/extended/medical/DICOM/dicomReader/include/DicomFileCT.hh>

Inheritance diagram for DicomFileCT:

Collaboration diagram for DicomFileCT:

Public Member Functions
	DicomFileCT ()
	DicomFileCT (DcmDataset *dset)
	~DicomFileCT ()
void	BuildMaterials ()
void	DumpMateIDsToTextFile (std::ofstream &fout)
void	DumpDensitiesToTextFile (std::ofstream &fout)
void	BuildStructureIDs ()
void	DumpStructureIDsToTextFile (std::ofstream &fout)
Public Member Functions inherited from DicomVFileImage
	DicomVFileImage ()
	DicomVFileImage (DcmDataset *dset)
	~DicomVFileImage ()
virtual void	ReadData ()
void	operator+= (const DicomVFileImage &rhs)
DicomVFileImage	operator+ (const DicomVFileImage &rhs)
void	DumpHeaderToTextFile (std::ofstream &fout)
G4int	GetNoVoxelX () const
G4int	GetNoVoxelY () const
G4int	GetNoVoxelZ () const
G4int	GetNoVoxels () const
G4double	GetMinX () const
G4double	GetMinY () const
G4double	GetMinZ () const
G4double	GetMaxX () const
G4double	GetMaxY () const
G4double	GetMaxZ () const
void	SetNoVoxelX (const G4int &val)
void	SetNoVoxelY (const G4int &val)
void	SetNoVoxelZ (const G4int &val)
void	SetMinX (const G4double &val)
void	SetMaxX (const G4double &val)
void	SetMinY (const G4double &val)
void	SetMaxY (const G4double &val)
void	SetMinZ (const G4double &val)
void	SetMaxZ (const G4double &val)
const G4double &	GetLocation () const
void	SetLocation (const G4double &val)
G4ThreeVector	GetOrientationRows () const
G4ThreeVector	GetOrientationColumns () const
Public Member Functions inherited from DicomVFile
	DicomVFile ()
	DicomVFile (DcmDataset *dset)
	~DicomVFile ()
void	SetFileName (G4String fName)

Private Attributes
std::vector< size_t >	fMateIDs
std::vector< G4double >	fDensities
std::vector< G4int >	fStructure

Additional Inherited Members
Protected Member Functions inherited from DicomVFile
virtual std::vector< G4double >	Read1Data (DcmDataset *dset, DcmTagKey tagKey, G4int nData)
virtual OFString	Read1DataStr (DcmDataset *dset, DcmTagKey tagKey)
Protected Attributes inherited from DicomVFileImage
G4double	fLocation
G4double	fBitAllocated
G4double	fRescaleSlope
G4double	fRescaleIntercept
G4int	fNoVoxelX
G4int	fNoVoxelY
G4int	fNoVoxelZ
G4double	fMinX
G4double	fMinY
G4double	fMinZ
G4double	fMaxX
G4double	fMaxY
G4double	fMaxZ
G4double	fVoxelDimX
G4double	fVoxelDimY
G4double	fVoxelDimZ
G4ThreeVector	fOrientationRows
G4ThreeVector	fOrientationColumns
std::vector< int >	fHounsfieldV
DicomFileMgr *	theFileMgr

Detailed Description

Definition at line 31 of file DicomFileCT.hh.

View newest version in sPHENIX GitHub at line 31 of file DicomFileCT.hh

Constructor & Destructor Documentation

DicomFileCT::DicomFileCT

(

)

Definition at line 42 of file DicomFileCT.cc.

View newest version in sPHENIX GitHub at line 42 of file DicomFileCT.cc

DicomFileCT::DicomFileCT

(

DcmDataset *

dset

)

Definition at line 47 of file DicomFileCT.cc.

View newest version in sPHENIX GitHub at line 47 of file DicomFileCT.cc

DicomFileCT::~DicomFileCT ( )

inline

Definition at line 36 of file DicomFileCT.hh.

View newest version in sPHENIX GitHub at line 36 of file DicomFileCT.hh

Member Function Documentation

void DicomFileCT::BuildMaterials

(

)

Definition at line 52 of file DicomFileCT.cc.

View newest version in sPHENIX GitHub at line 52 of file DicomFileCT.cc

References FatalException, fDensities, DicomVFileImage::fHounsfieldV, fMateIDs, DicomVFileImage::fNoVoxelX, DicomVFileImage::fNoVoxelY, G4Exception(), DicomFileMgr::GetCompression(), DicomFileMgr::GetMaterialIndex(), DicomFileMgr::GetMaterialIndexByDensity(), DicomFileMgr::Hounsfield2density(), DicomFileMgr::IsMaterialsDensity(), min, DicomVFileImage::theFileMgr, and nlohmann::to_string().

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void DicomFileCT::BuildStructureIDs

(

)

Definition at line 130 of file DicomFileCT.cc.

View newest version in sPHENIX GitHub at line 130 of file DicomFileCT.cc

References DBL_MAX, debugVerb, FatalException, DicomVFileImage::fLocation, DicomVFileImage::fMaxX, DicomVFileImage::fMaxY, DicomVFileImage::fMaxZ, DicomVFileImage::fMinX, DicomVFileImage::fMinY, DicomVFileImage::fMinZ, DicomVFileImage::fNoVoxelX, DicomVFileImage::fNoVoxelY, fStructure, DicomVFileImage::fVoxelDimX, DicomVFileImage::fVoxelDimY, G4cerr, G4cout, G4endl, G4Exception(), DicomFileMgr::GetCompression(), DicomROIContour::GetDirections(), DicomROIContour::GetGeomType(), DicomFileMgr::GetInstance(), DicomROIContour::GetPoints(), DicomFileMgr::GetStructFiles(), DicomFileMgr::GetStructureNCheck(), DicomFileMgr::GetStructureNMaxROI(), DicomROIContour::GetZ(), INT_MAX, JustWarning, max, min, testVerb, DicomVFileImage::theFileMgr, nlohmann::to_string(), DicomFileMgr::verbose, x, and y.

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void DicomFileCT::DumpDensitiesToTextFile

(

std::ofstream &

fout

)

Definition at line 110 of file DicomFileCT.cc.

View newest version in sPHENIX GitHub at line 110 of file DicomFileCT.cc

References fDensities, DicomVFile::fFileName, DicomVFileImage::fLocation, DicomVFileImage::fNoVoxelX, DicomVFileImage::fNoVoxelY, G4cout, G4endl, DicomFileMgr::GetCompression(), DicomVFileImage::theFileMgr, DicomFileMgr::verbose, and warningVerb.

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void DicomFileCT::DumpMateIDsToTextFile

(

std::ofstream &

fout

)

Definition at line 95 of file DicomFileCT.cc.

View newest version in sPHENIX GitHub at line 95 of file DicomFileCT.cc

References DicomVFile::fFileName, DicomVFileImage::fLocation, fMateIDs, DicomVFileImage::fNoVoxelX, DicomVFileImage::fNoVoxelY, G4cout, G4endl, DicomFileMgr::GetCompression(), DicomVFileImage::theFileMgr, DicomFileMgr::verbose, and warningVerb.

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void DicomFileCT::DumpStructureIDsToTextFile

(

std::ofstream &

fout

)

Definition at line 377 of file DicomFileCT.cc.

View newest version in sPHENIX GitHub at line 377 of file DicomFileCT.cc

References DicomVFile::fFileName, DicomVFileImage::fLocation, DicomVFileImage::fNoVoxelX, DicomVFileImage::fNoVoxelY, fStructure, G4cout, G4endl, DicomFileMgr::GetCompression(), DicomFileMgr::GetStructFiles(), DicomVFileImage::theFileMgr, and DicomFileMgr::verbose.

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Member Data Documentation

std::vector<G4double> DicomFileCT::fDensities

private

Definition at line 47 of file DicomFileCT.hh.

View newest version in sPHENIX GitHub at line 47 of file DicomFileCT.hh

Referenced by BuildMaterials(), and DumpDensitiesToTextFile().

std::vector<size_t> DicomFileCT::fMateIDs

private

Definition at line 46 of file DicomFileCT.hh.

View newest version in sPHENIX GitHub at line 46 of file DicomFileCT.hh

Referenced by BuildMaterials(), and DumpMateIDsToTextFile().

std::vector<G4int> DicomFileCT::fStructure

private

Definition at line 48 of file DicomFileCT.hh.

View newest version in sPHENIX GitHub at line 48 of file DicomFileCT.hh

Referenced by BuildStructureIDs(), and DumpStructureIDsToTextFile().

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The documentation for this class was generated from the following files:

• geant4/tree/geant4-10.6-release/examples/extended/medical/DICOM/dicomReader/include/DicomFileCT.hh
• geant4/tree/geant4-10.6-release/examples/extended/medical/DICOM/dicomReader/src/DicomFileCT.cc