G4DNAMoleculeEncounterStepper Class Reference

#include <geant4/tree/geant4-10.6-release/source/processes/electromagnetic/dna/models/include/G4DNAMoleculeEncounterStepper.hh>

Inheritance diagram for G4DNAMoleculeEncounterStepper:

Collaboration diagram for G4DNAMoleculeEncounterStepper:

Classes
class	Utils

Public Member Functions
	G4DNAMoleculeEncounterStepper ()
virtual	~G4DNAMoleculeEncounterStepper ()
	G4DNAMoleculeEncounterStepper (const G4DNAMoleculeEncounterStepper &)=delete
G4DNAMoleculeEncounterStepper &	operator= (const G4DNAMoleculeEncounterStepper &)=delete
virtual void	Prepare ()
virtual G4double	CalculateStep (const G4Track &, const G4double &)
void	SetReactionModel (G4VDNAReactionModel *)
G4VDNAReactionModel *	GetReactionModel ()
void	SetVerbose (int)
Public Member Functions inherited from G4VITTimeStepComputer
	G4VITTimeStepComputer ()
virtual	~G4VITTimeStepComputer ()
	G4VITTimeStepComputer (const G4VITTimeStepComputer &)
G4VITTimeStepComputer &	operator= (const G4VITTimeStepComputer &other)
virtual void	Initialize ()
G4TrackVectorHandle	GetReactants ()
virtual void	ResetReactants ()
G4double	GetSampledMinTimeStep ()
void	SetReactionTable (const G4ITReactionTable *)
const G4ITReactionTable *	GetReactionTable ()

Private Member Functions
void	InitializeForNewTrack ()
void	CheckAndRecordResults (const Utils &, G4KDTreeResultHandle &)

Private Attributes
G4bool	fHasAlreadyReachedNullTime
const G4DNAMolecularReactionTable *&	fMolecularReactionTable
G4VDNAReactionModel *	fReactionModel
G4int	fVerbose

Additional Inherited Members
Static Public Member Functions inherited from G4VITTimeStepComputer
static void	SetTimes (const G4double &, const G4double &)
Protected Attributes inherited from G4VITTimeStepComputer
G4double	fSampledMinTimeStep
G4TrackVectorHandle	fReactants
const G4ITReactionTable *	fpReactionTable
Static Protected Attributes inherited from G4VITTimeStepComputer
static G4ThreadLocal G4double	fCurrentGlobalTime = -1
static G4ThreadLocal G4double	fUserMinTimeStep = -1

Detailed Description

Given a molecule G4DNAMoleculeEncounterStepper will calculate for its possible reactants what will be the minimum encounter time and the associated molecules.*

This model includes dynamical time steps as explained in "Computer-Aided Stochastic Modeling of the Radiolysis of Liquid Water", V. Michalik, M. Begusová, E. A. Bigildeev, Radiation Research, Vol. 149, No. 3 (Mar., 1998), pp. 224-236

Definition at line 68 of file G4DNAMoleculeEncounterStepper.hh.

View newest version in sPHENIX GitHub at line 68 of file G4DNAMoleculeEncounterStepper.hh

Constructor & Destructor Documentation

G4DNAMoleculeEncounterStepper::G4DNAMoleculeEncounterStepper

(

)

Definition at line 68 of file G4DNAMoleculeEncounterStepper.cc.

View newest version in sPHENIX GitHub at line 68 of file G4DNAMoleculeEncounterStepper.cc

G4DNAMoleculeEncounterStepper::~G4DNAMoleculeEncounterStepper ( )

virtualdefault

G4DNAMoleculeEncounterStepper::G4DNAMoleculeEncounterStepper ( const G4DNAMoleculeEncounterStepper &  )

delete

Member Function Documentation

G4double G4DNAMoleculeEncounterStepper::CalculateStep ( const G4Track &  trackA, const G4double &  userMinTimeStep  )

virtual

Implements G4VITTimeStepComputer.

Definition at line 119 of file G4DNAMoleculeEncounterStepper.cc.

View newest version in sPHENIX GitHub at line 119 of file G4DNAMoleculeEncounterStepper.cc

References G4DNAMolecularReactionTable::CanReactWith(), CheckAndRecordResults(), DBL_MAX, G4DNAMoleculeEncounterStepper::Utils::fConstant, fHasAlreadyReachedNullTime, fMolecularReactionTable, G4VITTimeStepComputer::fReactants, fReactionModel, G4VITTimeStepComputer::fSampledMinTimeStep, G4VITTimeStepComputer::fUserMinTimeStep, fVerbose, G4BestUnit, G4cout, G4endl, GetMolecule(), G4Molecule::GetName(), G4VDNAReactionModel::GetReactionRadius(), G4Track::GetTrackID(), G4VDNAReactionModel::Initialise(), InitializeForNewTrack(), G4ITFinder< T >::Instance(), it, r, Acts::IntegrationTest::R, and r2.

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void G4DNAMoleculeEncounterStepper::CheckAndRecordResults ( const Utils &  utils, G4KDTreeResultHandle &  results  )

private

Definition at line 311 of file G4DNAMoleculeEncounterStepper.cc.

View newest version in sPHENIX GitHub at line 311 of file G4DNAMoleculeEncounterStepper.cc

References fAlive, FatalErrorInArgument, G4DNAMoleculeEncounterStepper::Utils::fpMoleculeA, G4DNAMoleculeEncounterStepper::Utils::fpMoleculeB, G4DNAMoleculeEncounterStepper::Utils::fpTrackA, G4VITTimeStepComputer::fReactants, fVerbose, G4BestUnit, G4cout, G4endl, G4Exception(), G4Track::GetGlobalTime(), G4Molecule::GetName(), G4MolecularConfiguration::GetName(), G4Track::GetPosition(), G4IT::GetTrack(), G4Track::GetTrackID(), G4Track::GetTrackStatus(), and r2.

Referenced by CalculateStep().

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G4VDNAReactionModel * G4DNAMoleculeEncounterStepper::GetReactionModel

(

)

Definition at line 427 of file G4DNAMoleculeEncounterStepper.cc.

View newest version in sPHENIX GitHub at line 427 of file G4DNAMoleculeEncounterStepper.cc

References fReactionModel.

void G4DNAMoleculeEncounterStepper::InitializeForNewTrack ( )

private

Definition at line 101 of file G4DNAMoleculeEncounterStepper.cc.

View newest version in sPHENIX GitHub at line 101 of file G4DNAMoleculeEncounterStepper.cc

References DBL_MAX, fHasAlreadyReachedNullTime, G4VITTimeStepComputer::fReactants, and G4VITTimeStepComputer::fSampledMinTimeStep.

Referenced by CalculateStep().

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G4DNAMoleculeEncounterStepper& G4DNAMoleculeEncounterStepper::operator= ( const G4DNAMoleculeEncounterStepper &  )

delete

void G4DNAMoleculeEncounterStepper::Prepare ( )

virtual

Reimplemented from G4VITTimeStepComputer.

Definition at line 79 of file G4DNAMoleculeEncounterStepper.cc.

View newest version in sPHENIX GitHub at line 79 of file G4DNAMoleculeEncounterStepper.cc

References G4cout, G4endl, G4ITFinder< T >::Instance(), G4MemStat::MemoryUsage(), G4VITTimeStepComputer::Prepare(), and G4ITFinder< T >::UpdatePositionMap().

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void G4DNAMoleculeEncounterStepper::SetReactionModel

(

G4VDNAReactionModel *

pReactionModel

)

Definition at line 422 of file G4DNAMoleculeEncounterStepper.cc.

View newest version in sPHENIX GitHub at line 422 of file G4DNAMoleculeEncounterStepper.cc

References fReactionModel.

void G4DNAMoleculeEncounterStepper::SetVerbose

(

int

flag

)

Definition at line 432 of file G4DNAMoleculeEncounterStepper.cc.

View newest version in sPHENIX GitHub at line 432 of file G4DNAMoleculeEncounterStepper.cc

References fVerbose.

Member Data Documentation

G4bool G4DNAMoleculeEncounterStepper::fHasAlreadyReachedNullTime

private

Definition at line 96 of file G4DNAMoleculeEncounterStepper.hh.

View newest version in sPHENIX GitHub at line 96 of file G4DNAMoleculeEncounterStepper.hh

Referenced by CalculateStep(), and InitializeForNewTrack().

const G4DNAMolecularReactionTable*& G4DNAMoleculeEncounterStepper::fMolecularReactionTable

private

Definition at line 98 of file G4DNAMoleculeEncounterStepper.hh.

View newest version in sPHENIX GitHub at line 98 of file G4DNAMoleculeEncounterStepper.hh

Referenced by CalculateStep().

G4VDNAReactionModel* G4DNAMoleculeEncounterStepper::fReactionModel

private

Definition at line 99 of file G4DNAMoleculeEncounterStepper.hh.

View newest version in sPHENIX GitHub at line 99 of file G4DNAMoleculeEncounterStepper.hh

Referenced by CalculateStep(), GetReactionModel(), and SetReactionModel().

G4int G4DNAMoleculeEncounterStepper::fVerbose

private

Definition at line 100 of file G4DNAMoleculeEncounterStepper.hh.

View newest version in sPHENIX GitHub at line 100 of file G4DNAMoleculeEncounterStepper.hh

Referenced by CalculateStep(), CheckAndRecordResults(), and SetVerbose().

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The documentation for this class was generated from the following files:

• geant4/tree/geant4-10.6-release/source/processes/electromagnetic/dna/models/include/G4DNAMoleculeEncounterStepper.hh
• geant4/tree/geant4-10.6-release/source/processes/electromagnetic/dna/models/src/G4DNAMoleculeEncounterStepper.cc